EvryRNA : RNA3DClust

Semi-supervised segmentation of RNA 3D structures using density-based clustering

  Non-coding RNAs, especially the long ones, are likely to contain structurally compact regions, reminiscent of the 3D domains found in proteins. Knowing the domain composition of RNA is necessary for a divide-and-conquer strategy to solve the RNA folding problem. The RNA3DClust tool can segment RNA molecules into such substructures, following a clustering-based approach.

 

 

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References

How to cite RNA3DClust:
  • Le Q.K., Angel E., Tahi F., Postic G. (2025).Semi-supervised segmentation of RNA 3D structures using density-based clustering. Computational and Structural Biotechnology Journal, 27, 3966-3984
    https://doi.org/10.1016/j.csbj.2025.08.037
For any questions, comments or suggestions about RNA3DClust, please feel free to contact: guillaume.postic@universite-paris-saclay.fr